Nature research paper: Visualizing protein breathing motions associated with aromatic ring flipping
, Distribution of amino acid types at the position of Y526 of JIP1-SH3 following a sequence alignment of all 320 SH3 domains., Sequence alignment of all identified SH3 domains carrying either a phenylalanine or tyrosine at the position of Y526 in JIP1-SH3. For each sequence the PCA group is indicated along with the PDB code and resolution of available crystal structures.
, Comparison of the crystal structures of the H493A and V517A variants of JIP1-SH3. Structural features are conserved including similar side chain conformations., Comparison of the crystal structures of JIP1-SH3 and its A541L variant with arrows indicating the major conformational rearrangements between the WT protein and the variant., Illustration of the backbone conformation of the β-sheet formed between the 516–521 and 524–529 regions in the WT protein , and in the A541L variant .
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